If you remove a door this is permanent, the only way to fix this is by doing some sketchy work with the copy-paste plugin and trying to get the door in there, but you'll never get it back the same way.
I've updated puzzlechainrepair and this should fix most if not all issues, it's at least better than the default debug.puzzleprefabrespawn  which now removes all puzzle components placed by players and doesn't even fix the issues of the puzzles at all.

please elaborate on the method how to put the doors back? :D

or update the puzzlechainrepair and add something to reset the doors.. would be tremendously helpful

Idk how is supposed to work via puzzel repair plugin, but got problem with launch site red card one electrical ocmponent missing. I will wait until someone try to jump it and will try live test with him to repair via command...

If you have the plugin installed you can simply run the puzzlerepair command and it should respawn all the puzzle components and make the puzzles work again.
The plugin also works with the default debug.puzzleprefabrespawn command but this is not recommended since if the plugin unloads for some reason that command will remove all electricity components placed by players too.

tnx fo help