This plugin seems to target the scientists at the Abandoned Military Base, but not "bots" created by plug-ins such as BotReSpawn.  The logic is there, but maybe not pointed in all directions?

This plugin doesn't really have logic for targeting. It simply uses the Rust defaults. The only exception is if the bots are in a safe zone.

Why does it target the scientists in the Abandoned Military Base?

I assume it should target all players and NPCs. If it's not targeting some, there might be another plugin causing that.