I was playing on my server with some friends when I edited something on accident and everyone crashed due to stack overload I think, anyways now whenever I try to load my server it doesn't use any of the data I have set up, like the seed id or the seed size, nothing it creates a whole new world. It doesn't even use the name I have inputted into the "server. host name". Any ideas?

Check your startup parameter for server.identity then make sure the directory exists. So for example if your server.identity is 'rustserver' then this directory should exist and contain your map, player data etc:

~/yoursvrhome/server/rustserver